BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019D06SP1|AL427477
(935 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1362 1792 0.0
>3x_Contig1362
Length = 8864
Score = 1792 bits (901), Expect = 0.0
Identities = 925/934 (99%), Gaps = 2/934 (0%)
Strand = Plus / Plus
Query: 1 ctttgakcccagcttcaattcctaatcattaagaggttccagttcccacaggattgtgaa 60
|||||| |||| |||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 6334 ctttgatcccatcttcaattcc-aatcattaagaggttccagttcccacaggattgtgaa 6392
Query: 61 ttactactggacctgtatgaacacgtagacaatgtgctgacgttgttcgattctggtgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6393 ttactactggacctgtatgaacacgtagacaatgtgctgacgttgttcgattctggtgaa 6452
Query: 121 ggtggcactggtgagaaattgaattggagtgcaatttccagttggtctgcaagtcatccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6453 ggtggcactggtgagaaattgaattggagtgcaatttccagttggtctgcaagtcatccc 6512
Query: 181 gagataaaattcattatcgctggtggattgaatcctgataacgtttctgttgccattaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6513 gagataaaattcattatcgctggtggattgaatcctgataacgtttctgttgccattaat 6572
Query: 241 atgttaccaaatgcgatcggtgtcgatgtaagtggaggagtagagactgatggtatcaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6573 atgttaccaaatgcgatcggtgtcgatgtaagtggaggagtagagactgatggtatcaag 6632
Query: 301 gatttagaaaaggtaaagctattcatccagcaggcctctcaatagaggaaaaaacgtatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6633 gatttagaaaaggtaaagctattcatccagcaggcctctcaatagaggaaaaaacgtatc 6692
Query: 361 tttcttcaattacacatacgtatatatmanttgatatatatatagtgaatgatcgttcca 420
||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct: 6693 tttcttcaattacacatacgtatatataaattgatatatatatagtgaatgatcgttcca 6752
Query: 421 ctttttaagcagaaccggagatgaagaaccatttgtcaatggacttgtcgattggttcat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6753 ctttttaagcagaaccggagatgaagaaccatttgtcaatggacttgtcgattggttcat 6812
Query: 481 ctggcaagacgttagcagctggaaca-cagaggcagcttcggctgagtaagtagcagtgt 539
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 6813 ctggcaagacgttagcagctggaacagcagaggcagcttcggctgagtaagtagcagtgt 6872
Query: 540 cagacaaagtggtgttagtcaagtcgatcttcttggcatcagcagacttaccagaaatca 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6873 cagacaaagtggtgttagtcaagtcgatcttcttggcatcagcagacttaccagaaatca 6932
Query: 600 acttcttccaggcttcgttacattctctgatgacgtccaaggtgtacttcttgttcttgg 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6933 acttcttccaggcttcgttacattctctgatgacgtccaaggtgtacttcttgttcttgg 6992
Query: 660 cttcaccggagaaggcaaattggttttctggcttaccatctgggatcttgtagattctga 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6993 cttcaccggagaaggcaaattggttttctggcttaccatctgggatcttgtagattctga 7052
Query: 720 accattcattggtggctctcaacaaacctggtaaatgcttttcaacatcttcgatgtcgt 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7053 accattcattggtggctctcaacaaacctggtaaatgcttttcaacatcttcgatgtcgt 7112
Query: 780 tcaacttaggagccaatggatcgttaatatcgatggcaatgaccttccagtcagtttcac 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7113 tcaacttaggagccaatggatcgttaatatcgatggcaatgaccttccagtcagtttcac 7172
Query: 840 cttcgtccaamaatgccataamaccaagaaccttgacttgtttcamttgaccagtgtaag 899
|||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct: 7173 cttcgtccaacaatgccataacaccaagaaccttgacttgtttcacttgaccagtgtaag 7232
Query: 900 caacttgctcaccgatttccaagacatccaatgg 933
||||||||||||||||||||||||||||||||||
Sbjct: 7233 caacttgctcaccgatttccaagacatccaatgg 7266
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8648
Number of Sequences: 1807
Number of extensions: 8648
Number of successful extensions: 41
Number of sequences better than 1.0e-20: 1
length of query: 935
length of database: 10,358,551
effective HSP length: 16
effective length of query: 919
effective length of database: 10,329,639
effective search space: 9492938241
effective search space used: 9492938241
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)